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TranScout Classification

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Interested in making your own queries or analyses locally? You can download Analyses made with TranScout, TransMem and Protloc. MySQL dumps are compressed with bzip. Use GNU bunzip program to uncompress them. Note: Use SAVE AS...

TranScout Classification and Defintions

Homo sapiensTranScoutTransMemProtLoc
Mus musculusTranScoutTransMemProtLoc
Rattus norvegicusTranScoutTransMemProtLoc
Drosophila melanogasterTranScoutTransMemProtLoc
Arabidopsis thalianaTranScoutTransMemProtLoc
Caenorhabditis elegansTranScoutTransMemProtLoc
Saccharomyces cerevisiaeTranScoutTransMemProtLoc
Schizosaccharomyces pombeTranScoutTransMemProtLoc
Guillardia thetaTranScoutTransMemProtLoc
Dumps of TransMem has been set to a minimum threshold window of 9 residues.
If using Postgres as your DBMS, this link may be helpful to convert these MySQL dumps.

  • Current and anterior versions of IPI and SPTR-NR proteomes can be found at EBI from this link. There you can also find analysis of those proteomes with InterPro.
  • InterPro2GO mappings can be downloaded.
  • Gene Ontology Annotation (GOA@EBI) analyses are available from here.




Centre Prote˛mica i BioinformÓtica Aplicada