ACCESSION ANNOTATION INTERPRO GOA TRS Organism: H.sapiens M.musculus R.norvegicus D.melanogaster A.thaliana C.elegans G.theta S.cerevisiae S.pombe Restrict to TranScout Annotated Entries Restrict to InterPro Annotated Entries   Need Help? TranScout Classification Home Analyses Download References Contact About this site TrSDB-current

TrSDB Analyses

Guillardia theta Proteome statistics

Proteins predicted with TranScout with their associated probability (at least one domain detected as a given probability). Priority to probabilities is the following one: VERY PROBABLE > PROBABLE > POSSIBLE.

	POSSIBLE	PROBABLE	VERY PROBABLE
TranScout detected	56	29	2

Proteins with at least one TRS motif detected by TranScout : 87
Protein entries in current proteome : 451


Predicted TranScout motifs by type and probability :

TRS	Signature	Function	Possible	Probable	Very Probable	Total
TRS0001	Cys2His2 zinc finger transcription factors	DNA-binding	44	16	0	60
TRS0026	bZIP transcription factors	DNA-binding	1	0	0	1
TRS0029	Heat shock transcription factors	DNA-binding	1	0	1	2
TRS0030	Fork head / winged helix transcription factors	DNA-binding	5	16	0	21
TRS0032	TATA-binding proteins	DNA-binding	1	0	1	2
TRS0041	LacI family of transcription factors	DNA-binding	9	1	0	10
TRS0045	AraC family of transcription factors	DNA-binding	1	1	0	2
TRS0047	TetR family of transcription factors	DNA-binding	2	1	0	3
TRS0048	LuxR family of transcriptional activator	DNA-binding	4	0	0	4
TRS0068	Some RING-type zinc fingers	Prot-prot interaction	3	0	0	3

TRS motifs numbers in different Eukaryote Proteomes


Entries with TranScout predicted Transcription Factor signatures (just DNA binding ones) against InterPro.

	All Probs InterPro	All Probs/ProtLoc InterPro	Very Probable InterPro	Very Probable/ProtLoc InterPro
	31 Incognito 10	4 Incognito 3	0 Incognito 0	0 Incognito 0
	50 Incognito 7	8 Incognito 0	0 Incognito 0	0 Incognito 0
	4 Incognito 0	1 Incognito 0	2 Incognito 0	0 Incognito 0
Total	85	13	2	0

Symbol Codes

Entries with TranScout predicted Transcription Factor signatures (just DNA binding ones) against GOA.

	All Probs GOA	All Probs/ProtLoc GOA	Very Probable GOA	Very Probable/ProtLoc GOA
	47 Incognito 14	4 Incognito 3	1 Incognito 0	0 Incognito 0
	35 Incognito 3	8 Incognito 0	0 Incognito 0	0 Incognito 0
	3 Incognito 0	1 Incognito 0	1 Incognito 0	0 Incognito 0
Total	85	13	2	0

Symbol Codes

Entries with TranScout predicted Transcription Factor signatures (just DNA binding ones) against InterPro & GOA.

	All Probs InterPro & GOA	All Probs/ProtLoc InterPro & GOA	Very Probable InterPro & GOA	Very Probable/ProtLoc InterPro & GOA
	29 Incognito 10	4 Incognito 3	0 Incognito 0	0 Incognito 0
	52 Incognito 7	8 Incognito 0	0 Incognito 0	0 Incognito 0
	4 Incognito 0	1 Incognito 0	2 Incognito 0	0 Incognito 0
Total	85	13	2	0

Symbol Codes

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	All Probs	All Probs/ProtLoc	Very Probable	Very Probable/ProtLoc
	17	3	0	0

Symbol Codes

	All Probs	All Probs/ProtLoc	Very Probable	Very Probable/ProtLoc
Entries with predicted Transcription Factor associated motifs but not common Transcription Factor motifs (DNA-binding ones)	2	0	0	0